Jonas Nilsson

• A macrophage-collagen fragment axis mediates subcutaneous adipose tissue remodeling in mice

  Milica Vujičić, Isabella Broderick, Pegah Salmantabar, Charlene Perian, Jonas Nilsson, Carina Sihlbom, Ingrid Wernstedt Asterholm
  Proceedings of the National Academy of Sciences of the United States of America - 2024
• N-glycoproteomic analyses of human intestinal enteroids, varying in histo-blood group geno- and phenotypes, reveal a wide repertoire of fucosylated glycoproteins

  Jonas Nilsson, Inga Rimkute, Carina Sihlbom, Victoria R. Tenge, Shih-Ching Lin, Robert L. Atmar, Mary K. Estes, Göran Larson
  GLYCOBIOLOGY - 2024
• Expression of influenza A virus glycan receptor candidates in mallard, chicken, and tufted duck

  Jonas Nilsson, Per Eriksson, Mahmoud M. Naguib, Elinor Jax, Carina Sihlbom, Britt-Marie Olsson, Ake Lundkvist, Bjorn Olsen, Josef D. Jarhult, Göran Larson, Patrik Ellstrom
  GLYCOBIOLOGY - 2024
• Characterization of MdpS: an in-depth analysis of a MUC5B-degrading protease from Streptococcus oralis

  Fredrik Leo, Rolf Lood, Kristina A Thomsson, Jonas Nilsson, Gunnel Svensater, Claes Wickstrom
  FRONTIERS IN MICROBIOLOGY - 2024
• Glycan Complexity and Heterogeneity of Glycoproteins in Somatic Extracts and Secretome of the Infective Stage of the Helminth Fasciola hepatica

  Carolina De Marco Verissimo, Krystyna Cwiklinski, Jonas Nilsson, Ekaterina Mirgorodskaya, Chunsheng Jin, Niclas G. Karlsson, John P. Dalton
  Molecular and cellular proteomics : MCP - 2023
• A glycomic workflow for LC-MS/MS analysis of urine glycosaminoglycan biomarkers in mucopolysaccharidoses

  Jonas Nilsson, Andrea Persson, Egor Vorontsov, Mahnaz Nikpour, Fredrik Noborn, Göran Larson, Maria K. Blomqvist
  Glycoconjugate Journal - 2023
• Mapping the Human Chondroitin Sulfate Glycoproteome Reveals an Unexpected Correlation Between Glycan Sulfation and Attachment Site Characteristics.

  Fredrik Noborn, Jonas Nilsson, Carina Sihlbom, Mahnaz Nikpour, Lena Kjellén, Göran Larson
  Molecular & cellular proteomics : MCP - 2023
• Impact of estrogen on IgG glycosylation and serum protein glycosylation in a murine model of healthy postmenopause.

  Priti Gupta, Tibor Sághy, Jauqueline Nordqvist, Jonas Nilsson, Hans Carlsten, Karin Horkeby, Petra Henning, Cecilia Engdahl
  Frontiers in endocrinology - 2023
• Site-specific glycosylation of proteoglycans: A revisited frontier in proteoglycan research

  Fredrik Noborn, Jonas Nilsson, Göran Larson
  Matrix Biology - 2022
• Glycoproteomic and Phenotypic Elucidation of B4GALNT2 Expression Variants in the SID Histo-Blood Group System

  L. Stenfelt, Jonas Nilsson, A. Hellberg, Y. W. Liew, J. Morrison, Göran Larson, M. L. Olsson
  International Journal of Molecular Sciences - 2022
• A Glycoproteomic Approach to Identify Novel Proteoglycans

  Fredrik Noborn, Mahnaz Nikpour, Andrea Persson, Carina Sihlbom, Jonas Nilsson, Göran Larson
  Glycosaminoglycans. Methods in Molecular Biology, vol 2303. Balagurunathan K., Nakato H., Desai U., Saijoh Y. (eds) - 2022
• Expanding the Chondroitin Sulfate Glycoproteome - But How Far?

  Fredrik Noborn, Mahnaz Nikpour, Andrea Persson, Jonas Nilsson, Göran Larson
  Frontiers in cell and developmental biology - 2021
• Community evaluation of glycoproteomics informatics solutions reveals high-performance search strategies for serum glycopeptide analysis

  R. Kawahara, A. Chernykh, K. Alagesan, M. Bern, W. Q. Cao, R. J. Chalkley, K. Cheng, M. S. Choo, N. Edwards, R. Goldman, M. Hoffmann, Y. W. Hu, Y. F. Huang, J. Y. Kim, D. Kletter, B. Liquet, M. Q. Liu, Y. Mechref, B. Meng, S. Neelamegham, T. Nguyen-Khuong, Jonas Nilsson, A. Pap, G. W. Park, B. L. Parker, C. L. Pegg, J. M. Penninger, T. K. Phung, M. Pioch, E. Rapp, E. Sakalli, M. Sanda, B. L. Schulz, N. E. Scott, G. Sofronov, J. Stadlmann, S. Y. Vakhrushev, C. M. Woo, H. Y. Wu, P. Y. Yang, W. T. Ying, H. Zhang, Y. Zhang, J. F. Zhao, J. Zaia, S. M. Haslam, G. Palmisano, J. S. Yoo, Göran Larson, K. H. Khoo, K. F. Medzihradszky, D. Kolarich, N. H. Packer, M. Thaysen-Andersen
  Nature Methods - 2021
• Proteoglycan profiling of human, rat and mouse insulin-secreting cells

  Mahnaz Nikpour, Jonas Nilsson, Andrea Persson, Fredrik Noborn, Egor Vorontsov, Göran Larson
  Glycobiology - 2021
• Glycosaminoglycan Domain Mapping of Cellular Chondroitin/Dermatan Sulfates

  Andrea Persson, Egor Vorontsov, Göran Larson, Jonas Nilsson
  Scientific Reports - 2020
• Chondroitin sulfate proteoglycan Windpipe modulates Hedgehog signaling in Drosophila

  M. Takemura, Fredrik Noborn, Jonas Nilsson, N. Bowden, E. Nakato, S. Baker, T. Y. Su, Göran Larson, H. Nakato
  Molecular Biology of the Cell - 2020
• Histo-blood group antigens of glycosphingolipids predict susceptibility of human intestinal enteroids to norovirus infection

  Inga Rimkute, K. Thorsteinsson, Marcus Henricsson, V. R. Tenge, X. M. Yu, S. C. Lin, K. Haga, R. L. Atmar, Nils Y Lycke, Jonas Nilsson, M. K. Estes, M. Bally, Göran Larson
  Journal of Biological Chemistry - 2020
• An affinity chromatography and glycoproteomics workflow to profile the chondroitin sulfate proteoglycans that interact with malarial VAR2CSA in the placenta and in cancer

  A. G. Toledo, J. Pihl, C. B. Spliid, Andrea Persson, Jonas Nilsson, M. A. Pereira, T. Gustavsson, S. Choudhary, H. Z. Oo, P. C. Black, M. Daugaard, J. D. Esko, Göran Larson, A. Salanti, T. M. Clausen
  Glycobiology - 2020
• NIST Interlaboratory Study on Glycosylation Analysis of Monoclonal Antibodies: Comparison of Results from Diverse Analytical Methods

  M. L. A. De Leoz, D. L. Duewer, A. Fung, L. Liu, H. K. Yau, O. Potter, G. O. Staples, K. Furuki, R. Frenkel, Y. L. Hu, Z. Sosic, P. Q. Zhang, F. Altmann, C. Grunwald-Grube, C. Shao, J. Zaia, W. Evers, S. Pengelley, D. Suckau, A. Wiechmann, A. Resemann, W. Jabs, A. Beck, J. W. Froehlich, C. C. Huang, Y. Li, Y. M. Liu, S. W. Sun, Y. J. Wang, Y. Seo, H. J. An, N. C. Reichardt, J. E. Ruiz, S. Archer-Hartmann, P. Azadi, L. Bell, Z. Lakos, Y. M. An, J. F. Cipollo, M. Pucic-Bakovic, J. Stambuk, G. Lauc, X. Li, P. G. Wang, A. Bock, R. Hennig, E. Rapp, M. Creskey, T. D. Cyr, M. Nakano, T. Sugiyama, P. K. A. Leung, P. Link-Lenczowski, J. Jaworek, S. Yang, H. Zhang, T. Kelly, S. Klapoetke, R. Cao, J. Y. Kim, H. K. Lee, J. Y. Lee, J. S. Yoo, S. R. Kim, S. K. Suh, N. de Haan, D. Falck, G. S. M. Lageveen-Kammeijer, M. Wuhrer, R. J. Emery, R. P. Kozak, L. P. Liew, L. Royle, P. A. Urbanowicz, N. H. Packer, X. M. Song, A. Everest-Dass, E. Lattova, S. Cajic, K. Alagesan, D. Kolarich, T. Kasali, V. Lindo, Y. Chen, K. Goswami, B. Gau, R. Amunugama, R. Jones, C. J. M. Stroop, K. Kato, H. Yagi, S. Kondo, C. T. Yuen, A. Harazono, X. F. Shi, P. E. Magnelli, B. T. Kasper, L. Mahal, D. J. Harvey, R. O'Flaherty, P. M. Rudd, R. Saldova, E. S. Hecht, D. C. Muddiman, J. C. Kang, P. Bhoskar, D. Menard, A. Saati, C. Merle, S. Mast, S. Tep, J. Truong, T. Nishikaze, S. Sekiya, A. Shafer, S. Funaoka, M. Toyoda, P. de Vreugd, C. Caron, P. Pradhan, N. C. Tan, Y. Mechref, S. Patil, J. S. Rohrer, R. Chakrabarti, D. Dadke, M. Lahori, C. X. Zou, C. Cairo, B. Reiz, R. M. Whittal, C. B. Lebrilla, L. R. Wu, A. Guttman, M. Szigeti, B. G. Kremkow, K. H. Lee, C. Sihlbom, Barbara Adamczyk, Chunsheng Jin, Niclas G. Karlsson, Jessica Örnros, Göran Larson, Jonas Nilsson, B. Meyer, A. Wiegandt, E. Komatsu, H. Perreault, E. D. Bodnar, N. Said, Y. N. Francois, E. Leize-Wagner, S. Maier, A. Zeck, A. J. R. Heck, Y. Yang, R. Haselberg, Y. Q. Yu, W. Alley, J. W. Leone, H. Yuan, S. E. Stein
  Molecular & Cellular Proteomics - 2020
• Identification of a non-canonical chondroitin sulfate linkage region trisaccharide

  Andrea Persson, Jonas Nilsson, Egor Vorontsov, Fredrik Noborn, Göran Larson
  Glycobiology - 2019
• Recombinant Glycoprotein E of Varicella Zoster Virus Contains Glycan-Peptide Motifs That Modulate B Cell Epitopes into Discrete Immunological Signatures

  Rickard Nordén, Jonas Nilsson, Ebba Samuelsson, C. Risinger, C. Sihlbom, O. Blixt, Göran Larson, Sigvard Olofsson, Tomas Bergström
  International Journal of Molecular Sciences - 2019
• Synthetic standard aided quantification and structural characterization of amyloid-beta glycopeptides enriched from cerebrospinal fluid of Alzheimer's disease patients

  Jonas Nilsson, Gunnar Brinkmalm, S. Ramadan, L. Gilborne, Fredrik Noborn, Kaj Blennow, Anders Wallin, Johan Svensson, M. A. Abo-Riyas, X. F. Huang, Göran Larson
  Scientific Reports - 2019
• LC-MS/MS characterization of xyloside-primed glycosaminoglycans with cytotoxic properties reveals structural diversity and novel glycan modifications

  Andrea Persson, Alejandro Gomez Toledo, Egor Vorontsov, Waqas Nasir, D. Willen, Fredrik Noborn, U. Ellervik, K. Mani, Jonas Nilsson, Göran Larson
  Journal of Biological Chemistry - 2018
• Expanding the chondroitin glycoproteome of Caenorhabditis elegans.

  Fredrik Noborn, Alejandro Gomez Toledo, Waqas Nasir, Jonas Nilsson, Tabea Dierker, Lena Kjellén, Göran Larson
  The Journal of biological chemistry - 2018
• Characterization of Glycan Structures of Chondroitin Sulfate-Glycopeptides Facilitated by Sodium Ion-Pairing and Positive Mode LC-MS/MS.

  Jonas Nilsson, Fredrik Noborn, Alejandro Gomez Toledo, Waqas Nasir, Carina Sihlbom, Göran Larson
  Journal of the American Society for Mass Spectrometry - 2017
• Liquid chromatography-tandem mass spectrometry-based fragmentation analysis of glycopeptides

  Jonas Nilsson
  Glycoconjugate Journal - 2016
• Distinctive MS/MS Fragmentation Pathways of Glycopeptide-Generated Oxonium Ions Provide Evidence of the Glycan Structure.

  Jin Yu, Manuel Schorlemer, Alejandro Gomez Toledo, Christian Pett, Carina Sihlbom, Göran Larson, Ulrika Westerlind, Jonas Nilsson
  Chemistry (Weinheim an der Bergstrasse, Germany) - 2016
• Global analysis of somatic structural genomic alterations and their impact on gene expression in diverse human cancers.

  Babak Alaei-Mahabadi, Joydeep Bhadury, Joakim Karlsson, Jonas Nilsson, Erik Larsson
  Proceedings of the National Academy of Sciences of the United States of America - 2016
• Site-specific identification of heparan and chondroitin sulfate glycosaminoglycans in hybrid proteoglycans

  Fredrik Noborn, Alejandro Gomez Toledo, Anders Green, Waqas Nasir, Carina Sihlbom, Jonas Nilsson, Göran Larson
  Scientific Reports - 2016
• SweetNET: A Bioinformatics Workflow for Glycopeptide MS/MS Spectral Analysis

  Waqas Nasir, Alejandro Gomez Toledo, Fredrik Noborn, Jonas Nilsson, M. X. Wang, N. Bandeira, Göran Larson
  Journal of Proteome Research - 2016
• O-linked glycosylation of the mucin domain of the herpes simplex virus type 1 specific glycoprotein gC-1 is temporally regulated in a seed-and-spread manner.

  Rickard Nordén, Adnan Halim, Kristina Nyström, Eric P Bennett, Ulla Mandel, Sigvard Olofsson, Jonas Nilsson, Göran Larson
  The Journal of biological chemistry - 2015
• Positive mode LC-MS/MS analysis of chondroitin sulfate modified glycopeptides derived from light and heavy chains of the human inter-α-trypsin inhibitor complex

  Alejandro Gomez Toledo, Jonas Nilsson, Fredrik Noborn, Carina Sihlbom, Göran Larson
  Molecular and Cellular Proteomics - 2015
• Effect of Increased Radiotoxicity on Survival of Patients with Non-small Cell Lung Cancer Treated with Curatively Intended Radiotherapy.

  Georg Holgersson, Stefan Bergström, Per Liv, Jonas Nilsson, Per Edlund, Carl Blomberg, Jan Nyman, Signe Friesland, Simon Ekman, Thomas Asklund, Roger Henriksson, Michael Bergqvist
  Anticancer research - 2015
• SorLA CR-Domains Protect the Amyloid Precursor Protein against Processing.

  Arnela Mehmedbasic, Sofie K Christensen, Jonas Nilsson, Ulla Rüetschi, Camilla Gustafsen, Annemarie Svane Aavild Poulsen, Rikke W Rasmussen, Anja N Fjorback, Göran Larson, Olav M Andersen
  The Journal of biological chemistry - 2015
• Identification of chondroitin sulfate linkage region glycopeptides reveals prohormones as a novel class of proteoglycans.

  Fredrik Noborn, Alejandro Gomez Toledo, Carina Sihlbom, Johan Lengqvist, Erik Fries, Lena Kjellén, Jonas Nilsson, Göran Larson
  Molecular & cellular proteomics : MCP - 2015
• LC-MS/MS characterization of combined glycogenin-1 and glycogenin-2 enzymatic activities reveals their self-glucosylation preferences.

  Johanna Nilsson, Adnan Halim, Erik Larsson, Ali-Reza Moslemi, Anders Oldfors, Göran Larson, Jonas Nilsson
  Biochimica et biophysica acta - 2014
• The effects of age on circulating vascular markers and cardiac prognostic markers, before and after 2 months home-based high-frequency exercise training in patients with stable coronary artery disease

  Smita DuttaRoy, Debashish Banerjee, Jonas Nilsson, Ola Hammarsten, Åsa Cider, Maria Bäck, Bertil Wennerblom, Mats Börjesson
  European Heart Journal. European Society of Cardiology, 30 August - 3 September 2014, Barcelona - 2014
• Automatic method for improved detection rate and visualization of liver uptake foci in diagnostic 111In-octreotide SPECT/CT investigations

  Tobias Magnander, Emma Wikberg, Jonas Nilsson, Johanna Svensson, Peter Gjertsson, Bo Wängberg, Magnus Båth, Peter Bernhardt
  XI Congress of World Federation of Nuclear Medicine and Biology, 27-31 August 2014, Cancun, Mexico - 2014
• Assignment of Saccharide Identities through Analysis of Oxonium Ion Fragmentation Profiles in LC-MS/MS of Glycopeptides.

  Adnan Halim, Ulrika Westerlind, Christian Pett, Manuel Schorlemer, Ulla Rüetschi, Gunnar Brinkmalm, Carina Sihlbom, Johan Lengqvist, Göran Larson, Jonas Nilsson
  Journal of proteome research - 2014
• Synthesis aided structural determination of amyloid-beta(1-15) glycopeptides, new biomarkers for Alzheimer's disease

  P. Wang, Jonas Nilsson, Gunnar Brinkmalm, Göran Larson, X. F. Huang
  Chemical Communications - 2014
• Parvovirus B19 VLP recognizes globoside in supported lipid bilayers

  Waqas Nasir, Jonas Nilsson, Sigvard Olofsson, Marta Bally, Gustaf E Rydell
  Virology - 2014
• Bioinspired Exosome-Mimetic Nanovesicles for Targeted Delivery of Chemotherapeutics to Malignant Tumors.

  Su Chul Jang, Oh Youn Kim, Chang Min Yoon, Dong-Sic Choi, Tae-Young Roh, Jaesung Park, Jonas Nilsson, Jan Lötvall, Yoon-Keun Kim, Yong Song Gho
  ACS nano - 2013
• Sialic acid capture-and-release and LC-MSn analysis of glycopeptides

  Jonas Nilsson, Göran Larson
  Methods in Molecular Biology - 2013
• Interlaboratory Study on Differential Analysis of Protein Glycosylation by Mass Spectrometry: The ABRF Glycoprotein Research Multi-Institutional Study 2012

  N. Leymarie, P. J. Griffin, K. Jonscher, D. Kolarich, R. Orlando, M. McComb, J. Zaia, J. Aguilan, W. R. Alley, F. Altmann, L. E. Ball, L. Basumallick, C. R. Bazemore-Walker, H. Behnken, M. A. Blank, K. J. Brown, S. C. Bunz, C. W. Cairo, J. F. Cipollo, R. Daneshfar, H. Desaire, R. R. Drake, E. P. Go, R. Goldman, C. Gruber, Adnan Halim, Y. Hathout, P. J. Hensbergen, D. M. Horn, D. Hurum, W. Jabs, Göran Larson, M. Ly, B. F. Mann, K. Marx, Y. Mechref, B. Meyer, U. Moginger, C. Neususs, Jonas Nilsson, M. V. Novotny, J. O. Nyalwidhe, N. H. Packer, P. Pompach, B. Reiz, A. Resemann, J. S. Rohrer, A. Ruthenbeck, M. Sanda, J. M. Schulz, U. Schweiger-Hufnagel, Carina Sihlbom, E. Song, G. O. Staples, D. Suckau, H. X. Tang, M. Thaysen-Andersen, R. I. Viner, Y. M. An, L. Valmuv, Y. Wada, M. Watson, M. Windwarder, R. Whittal, M. Wuhrer, Y. Y. Zhu, C. X. Zou
  Molecular & Cellular Proteomics - 2013
• Involvement of viral glycoprotein gC-1 in expression of the selectin ligand sialyl-Lewis X induced after infection with herpes simplex virus type 1.

  Rickard Nordén, Kristina Nyström, Beata Adamiak, Adnan Halim, Jonas Nilsson, Göran Larson, Edward Trybala, Sigvard Olofsson
  APMIS : acta pathologica, microbiologica, et immunologica Scandinavica - 2013
• Targeting the glycoproteome.

  Jonas Nilsson, Adnan Halim, Ammi Grahn, Göran Larson
  Glycoconjugate journal - 2013
• LC-MS/MS characterization of O-glycosylation sites and glycan structures of human cerebrospinal fluid glycoproteins.

  Adnan Halim, Ulla Rüetschi, Göran Larson, Jonas Nilsson
  Journal of Proteome Research - 2013
• An online nano-LC-ESI-FTICR-MS method for comprehensive characterization of endogenous fragments from amyloid β and amyloid precursor protein in human and cat cerebrospinal fluid.

  Gunnar Brinkmalm, Erik Portelius, Annika Öhrfelt, Niklas Mattsson, Rita Persson, Mikael K Gustavsson, Charles H Vite, Johan Gobom, Jan-Eric Månsson, Jonas Nilsson, Adnan Halim, Göran Larson, Ulla Rüetschi, Henrik Zetterberg, Kaj Blennow, Ann Brinkmalm-Westman
  Journal of mass spectrometry : JMS - 2012
• Molecular pathogenesis of a new glycogenosis caused by a glycogenin-1 mutation.

  Johanna Nilsson, Adnan Halim, Ali-Reza Moslemi, Anders Pedersen, Jonas Nilsson, Göran Larson, Anders Oldfors
  Biochimica et biophysica acta - 2012
• Human urinary glycoproteomics; attachment site specific analysis of N- and O-linked glycosylations by CID and ECD.

  Adnan Halim, Jonas Nilsson, Ulla Rüetschi, Camilla Hesse, Göran Larson
  Molecular & cellular proteomics : MCP - 2012

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