University of Gothenburg
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Contact us at BDC

If you want to get help with a project or to get more information about our support or our prices, please contact us by using our common e-mail address. You are also welcome to contact any member of the team if you would like to know more about our research support.

Management

Marcela Davila, Assoc. Prof.
Co-Head of Unit
Head of Clinical Genomics Gothenburg
Platform Coordinator Offices of Clinical Genomics

Per Sikora, Ph.D.
Co-Head of Unit
Co-Chair at Clinical Genomics Sweden

Gwenna Breton, Ph.D.
Centre Coordinator, Bioinformatics
Sektionsledare at Centrum för Medicinsk Genomik

Per Fahlberg, Ph.D. 
Centre Coordingator, Infrastructure

 

Bioinformatics unit

BIOINFORMATICS

Our expertise includes various NGS data analyses for Illumina and Thermo technologies such as: Human WGS for cancers and germline samples, gene panels, case-control studies, differential expression analysis, metagenomics, single cell analysis, spatial transcriptomics.

We also have experience with other bioinformatics analyses including: population genetics analyses, approximate bayesian computation analyses, GWAS, sequence bioinformatics, proteomics analyses, functional analysis, machine learning applied to biomarker discovery, data integration of omics data, databases (SQL) And our programming skills are within: Python, R, Shell, Snakemake, Nextflow.

STATISTICS

Our expertise includes: Statistics, proteomics analysis, microarray analysis, SNP analysis, GWAS,  data wrangling, visualization and programming (R, MATLAB, Python, SPSS, python, perl, SQL).

Sequencing unit

Our expertise includes:

  • Experimental design
  • DNA concentration measurements
  • DNA and RNA electrophoresis
  • DNA and chromatin fragmentation
  • NGS sequencing (Illumina and Ion Torrent platforms) targeting whole genome, mRNA and total RNA as well as DNA. Both bulk and single cell
  • Methylation arrays